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Browse CottonDB

CottonDB migration is underway. Please visit http://www.cottondb.org for new additions and most recent information.

This page provides different ways to search CottonDB. If you are unsure of the class structure of CottonDB or are in a hurry, use the Text Search. Just enter the text you are searching for and any matching items will be returned.

To explore the structure of CottonDB and examine data in each class, choose the Graphical Class Browser. You can also find out what kind of data each class contains and which classes are present.

AQL Query is for advanced users, who are familiar with the Ace Query Langauge. This method of searching is very powerful but requires considerable familiarity with CottonDB and AceDB. We will be adding examples and sample searches soon.

Presently, CottonDB is based on ACEDB version 4.9 (Richard Durbin and Jean Thierry-Mieg, MRC LMB Cambridge, England and CNRS, Montpellier, France, respectively) with modifications to model files derived from other plant genome databases presented at Agricultural Genome Information Server (AGIS).

As of Tuesday 09th of February 2010 07:29:48 PM CST Database is UP and items/class are as follows.

Allele: 36
Author: 15717
BAC_End_Sequence: 1070
BAC_Fingerprint: 17098
Clone: 4398
Colleague: 4319
Collection: 8
Enzyme: 2
Genus_Species: 35
Germplasm: 8355
Grin: 6
Image: 108
Journal: 1780
KeySet: 1
Laboratory: 233
Linkage_Group: 77
Locus: 1960
Map: 140
Mapping_Population: 3
Map_data: 1
Marker: 1060
Metabolite: 16
Model: 126
Motif: 346
NVT: 1
Oligo: 1856
Other_Locus: 1706
Paper: 10885
Pathology: 286
Pathway: 17
Pedigrees: 944
Polymorphism: 600
Primer: 1481
Probe: 928
Protein: 206
Sequence: 2571
Sequence_aGenomic_DNA: 53
Sequence_All: 55253
Sequence_a_EST: 7700
Sequence_EST_Contig: 1607
Sequence_EST_singleton: 8025
Sequence_hGenomic_DNA: 3481
Sequence_h_cDNA: 308
Sequence_h_EST: 13576
Sequence_h_STS: 22
Species: 196
SSR_Primer: 468
Tag: 1044
Trait_scores: 28168
Trait_Study: 5482


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